Probiotics, into ‘au natural’ or domestic goddess? Want to make your own? Check this post first!

Kombucha fermented tea

Probiotics have been around for millennia and are found naturally in certain foods, however does natural always mean safe? This post discusses the various types of probiotics that are home-made and discusses their safety and whether they will actually do what they propose to. This post has been rather challenging to write, it has produced lots of information, but little in the way of clinical evidence to directly prove that home-made products are more or less effective than shop bought, and little direct evidence in how effective they are at reducing gastrointestinal problems. This is perhaps not too surprising.

Home cultured dairy foods including yoghurt, cheese & clabbered milk.

There is nothing wrong in producing your own home-made yoghurts and cheeses, should you wish to. Kits are available on the internet and you may also wish to go on training courses, or review books to get started (will probably help to avoid costly mistakes!) Milk, if left un-refrigerated will sour, some types of milk will take longer to do this depending on the amount of bacteria they contain and the processes they have been exposed too, UHT milk contains very limited numbers of bacteria due to its heat treatment, so it will take longer to sour, for example. Starter cultures are required and can be purchased for this very process, but other ‘live’ milk products can be used as starters.


Kombucha is a Japanese fermented mushroom in tea and sugar, proposed to be taken as a tonic. It contains yeast and bacteria and is anecdotally suggested to reduce constipation and have benefits for myriad of other health complaints. Web & Pinterest searches revealed lots of information about how to make this at home, but it is also available to purchase as a manufactured product. A small number of case studies have reported serious side effects with taking this product as a drink, some of the cases had other medical problems which may have also been implicated, but symptoms have been reported in people who had no health problems too. Kombucha has resulted in jaundice (yellowing of skin and eyes due to damage to the liver,) one case had improvement to the liver after stopping taking kombucha, but one death was mentioned that was attributed to taking this product. We have no evidence that Kombucha improves constipation and although cases of serious side effects are rare and the data is old, it is probably worth avoiding taking home made kombucha as a health tonic, liver damage is a very serious problem that is best avoided. If you do wish to try komucha perhaps try the manufactured products but no evidence is available to suggest it helps with IBS for example.


Sauerkraut is a fermented vegetable product based on cabbage its direct translation is sour cabbage! It has reported both prebiotic (food and homes for bacteria) and probiotic actions. It is also a source of vitamin C, which helps your skin, and sauerkraut was used in history as food in winter to prevent scurvy. Sauerkraut also contains a substance called tyramine, some people have problems with tyramine and are informed to avoid this (MAOI diet,) – you will likely know, if you need to avoid this food!!

Sauerkraut has been produced and consumed in European countries for approximately 1000 years, and is widely available as a manufactured product in supermarkets. The bacteria that are found in sauerkraut are lactic acid bacteria and these produce an acid environment leading to its sour taste. When produced correctly it can be kept for several months in an airtight jar but as with all home-made products the possibility of producing pathogenic bacteria should be considered, the not so friendly ones, that can result in illness. unpasteurized (or home-made) varieties will contain more probiotic activity but hygiene and use of a reliable manufacturing method, is very important. Listeria has been found during fermentation of sauerkraut, therefore it may be advisable not to consume unpasteurized sauerkraut during pregnancy or also those people who may be at risk of illness such as those with weakened immune systems, or the very young & the elderly.

Their may be one drawback to this food for your gut, as a consequence of it containing some prebiotic features, due to it being based on cabbage. If you find eating foods containing oligosaccharides (a starchy prebiotic found in beans, cabbage, sprouts, for example!) results in intolerable gas and bloating, then sauerkraut is probably best avoided. But white cabbage has been tested and is low fodmap so sauerkraut based on white cabbage is likely OK to use but do check for other ingredients. However it is a dish that is readily available and is worth eating, if you like it. As for its effectiveness in promoting gut health a search on PubMed (published research papers) did not reveal any direct studies on the effectiveness of this product on gut health, but lots of data on the populations of bacteria and yeasts found in sauerkraut, so an indirect link may be possible, but as with most traditional foods, direct evidence is elusive and needs to be investigated.


On a basic Pubmed search an incredible 1,912 studies that mention kefir were found, so for a home manufactured product it seems to have attracted the attention of the scientists and clinical researchers! However in IBS for example non of these research papers have been reviewed systematically, therefore they are likely to not meet the strict criteria for good levels of evidence such as randomised controlled trials. Kefir is a stable cultured dairy product that contains yeasts and lactic acid bacteria of various different types, thirty bacteria species and 15 species of yeast have been identified. It can be purchased as a starter called Kefir ‘grains’ for producing live dairy products at home. Kefir has a large number of bacteria that are suggested to be able to pass into the gastrointestinal tract in beneficial numbers despite passing through the acidic conditions of the stomach (not all bacteria will survive to the small bowel.) It has even been used successfully to replace yeast in producing bread, as a consequence of the yeast species it contains. It is reputed to improve lactose intolerance (increased gas, bloating & diarrhoea when consuming lactose, a sugar found in dairy products) due to the lactic acid fermentation process, but many yoghurts and cheese have lower levels of lactose as a result of fermentation. It is probably best to introduce this food slowly and monitor you symptoms, if you are prone to lactose intolerance and wish to try it. A recent review reported that kefir is an important food and warrants further study, although this review had most of the data from animal studies and in vitro studies (studying the activity in cells, or in test tubes) so the research cannot be related directly to effects in humans. It is certainly and interesting product and does warrant further studies!


This is fermented milk and is similar to Kefir, it is made using different bacteria lactococcus lactis and Leuconostoc Mesenteroides, and this gives the yoghurt a different taste – less sour than traditional yoghurts. It is also available commercially; searches have not produced much data in English about whether this product is goof for digestive health but if you can read Swedish follow the link to learn more (lots of papers at the bottom of the page)

Tofu miso

These are fermented soya foods that do contain bacteria however don’t forget that bacteria may be affected by the cooking process, so how useful the probiotic effect is when these products are exposed to heat, is debatable.

As with all food preparation, food hygiene is vital to produce safe home-made products, ensure you use clean utensils, wash your hands and check the following link:

Some people are possibly more at risk from taking live products, during pregnancy UK advice is to avoid products containing unpasteurized milk, and soft cheeses that are mould-ripened, such as brie, camembert and chevre and others with a similar rind. Other cheeses you need to avoid are soft blue-veined cheeses such as Danish blue or gorgonzola. These are made with mould and they can contain Listeria, a type of bacteria that can harm your unborn baby. Also if you have been told by your doctor that you have a weak immune system (medically called immunocompromised) you are better to avoid taking live bacteria and food products that contain them.

Niksic M, Niebuhr SE, Dickson JS, Mendonca AF, Koziczkowski JJ, Ellingson JL  (2005) Survival of Listeria monocytogenes and Escherichia coli O157:H7 during sauerkraut fermentation. JFood Prot. Jul;68(7):1367-74.

Srinvisan R, Smolinski S, Greenbaum D, (1997) Probable gastrointestinal toxicity of kombucha tea J Gen Intern Med 12:643:644

Hertzler, S.R. and Clancy, S.M. (2003). Kefir improves lactose digestion and
tolerance in adults with lactose maldigestion. J. Am. Diet. Assoc. 103:582–

and AT˙IF C. SEYD˙IM1(2011) Review: Functional Properties of Kefir. Critical Reviews in Food Science and Nutrition, 51:261–268

Oggioni MR, Pozzi G, Valensin PE, et al; Recurrent septicemia in an immunocompromised patient due to probiotic strains of Bacillus subtilis. J Clin Microbiol. 1998 Jan;36(1):325-6

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I am a state registered dietitian. My speciality is dietary treatment of gut disorders such as irritable bowel syndrome, crohns disease, ulcerative colitis, coeliac disease, lactose & fructose malabsorption and multiple food intolerances. I have had lots of experience in other areas of dietetics and I wished to start this blog to spread the word about evidence based dietary treatments and dispel much of the quackery that is common with these diseases. All information on this site is of a general nature and is based on UK based treatments and guidelines. Please see your healthcare practitioner should you need more country specific information.

5 thoughts on “Probiotics, into ‘au natural’ or domestic goddess? Want to make your own? Check this post first!

  1. FUD spreading (Fear, Uncertainty, and Distrust), especially on the kombucha. I for one would love to see the references for jaundice, liver damage, and acidosis.

    Kombucha is not a mushroom anymore than sourdough starter is a mushroom. It is a Symbiotic colony of bacteria and yeast, no mushrooms/basidiomycetes involved (actually, it’s a scoby closely related to kefir. It is sometimes called “tea-kefir”). All fermenting has the potential to get contaminated if one is not doing it properly. Thankfully, we humans survived for as long as we did without refrigeration because of wild ferments. I’d also like to see citations for the claims that pasteurization is necessary/beneficial. One of the primary benefits of fermented foods (indeed all raw foods) is the enzymes they contain which help digest the food. This enzymatic content drops to nearly zero with heat treatment.

    Your opinions on the flavor of raw/plain kombucha are immaterial, many people don’t like the flavor of fresh vegetables. . .that holds no bearing on their nutritional or health benefits. I’ll thank you to keep personal opinion to op-ed pieces, and out of entries purporting to be educational.

    Some citations for your FUD, show you’ve got a clue of what you’re writing about (e.g. kombucha != mushroom), and some proper English (keep your commas on a shorter leash, eh?), and this might not be so bad of an article.

    BTW, do you have any personal experience with any of these fermenting cultures.

    1. Thank you for your comments. For the kombucha reference please see the bottom of the article, – this is from a medical journal so the evidence is correct, although they are case studies. People have to decide whether to try this product or not, (no – this is not a personal opinion, I do not have an opinion either way – if someone wishes to use this product that is their choice!) and though these effects are rare, they have occurred and need to be stated so that individuals can decide with full knowledge. I accept what you say about Kombucha I am an adult and willing to stand corrected where needed, however your other comments regarding how this article has been written are quite offensive and have shown you to be someone who is not able to provide an adult argument and resorting to making petty comments.

  2. Do you mind if I quote a couple of your articles as long as I provide credit
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    1. Hi I am not usually comfortable with my blog being associated directly with a profit making company. Thank you for your interest in my blog but I cannot endorse one particular commercial product.

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